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  5. PSME_00042564-RA

PSME_00042564-RA


Description : (at2g47800 : 256.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042564-RA
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
144775 No alias multidrug resistance-associated protein 5 0.04 Orthogroups_2024-Update
147933 No alias multidrug resistance-associated protein 4 0.02 Orthogroups_2024-Update
163772 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
163776 No alias multidrug resistance-associated protein 5 0.04 Orthogroups_2024-Update
402326 No alias multidrug resistance-associated protein 5 0.03 Orthogroups_2024-Update
409191 No alias multidrug resistance-associated protein 6 0.03 Orthogroups_2024-Update
A4A49_10435 No alias abc transporter c family member 13 0.04 Orthogroups_2024-Update
A4A49_11075 No alias abc transporter c family member 3 0.02 Orthogroups_2024-Update
At3g21250 No alias Multidrug resistance-associated protein 6... 0.03 Orthogroups_2024-Update
Bradi1g37840 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
Bradi1g48670 No alias multidrug resistance-associated protein 14 0.04 Orthogroups_2024-Update
Bradi2g00417 No alias multidrug resistance-associated protein 3 0.04 Orthogroups_2024-Update
Bradi2g04577 No alias multidrug resistance-associated protein 3 0.02 Orthogroups_2024-Update
Bradi5g03460 No alias multidrug resistance-associated protein 10 0.02 Orthogroups_2024-Update
Brara.G00736.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.G01873.1 No alias subfamily ABCC transporter 0.04 Orthogroups_2024-Update
Brara.I02815.1 No alias glutathione S-conjugate transporter & subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.I04331.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Brara.K00933.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G032218 No alias multidrug resistance-associated protein 9 0.03 Orthogroups_2024-Update
GRMZM2G084181 No alias multidrug resistance-associated protein 2 0.02 Orthogroups_2024-Update
Glyma.07G121900 No alias multidrug resistance-associated protein 9 0.04 Orthogroups_2024-Update
Glyma.09G044500 No alias multidrug resistance-associated protein 4 0.02 Orthogroups_2024-Update
Glyma.20G165000 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
HORVU3Hr1G085890.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
HORVU7Hr1G025040.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Kfl00493_0030 kfl00493_0030_v1.1 (at2g34660 : 286.0) encodes a multidrug... 0.01 Orthogroups_2024-Update
LOC_Os05g10730 No alias ABC transporter, ATP-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp5g02230.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
PSME_00021415-RA No alias (at2g47800 : 184.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update
Potri.001G362300 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update
Potri.003G034700 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
Potri.003G197200 No alias multidrug resistance-associated protein 3 0.03 Orthogroups_2024-Update
Pp1s402_25V6 No alias atp-binding sub-family c (cftr mrp) member 4 0.02 Orthogroups_2024-Update
Seita.4G239600.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Sobic.007G210500.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Solyc10g024420 No alias ABC transporter family protein (AHRD V3.3 *** B9IB53_POPTR) 0.02 Orthogroups_2024-Update
Solyc12g044820 No alias ABC transporter-like family-protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g003490 No alias ABC transporter 0.01 Orthogroups_2024-Update
Sopen07g033520 No alias ABC transporter 0.03 Orthogroups_2024-Update
Sopen08g002840 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen09g029840 No alias ABC transporter transmembrane region 0.04 Orthogroups_2024-Update
evm.model.tig00001254.7 No alias (at2g47800 : 162.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 109 143
No external refs found!