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  5. PSME_00042568-RA

PSME_00042568-RA


Description : (at4g11650 : 259.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (p33679|zeam_maize : 258.0) Zeamatin precursor - Zea mays (Maize) & (reliability: 518.0) & (original description: no original description)


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042568-RA
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
At4g38670 No alias Pathogenesis-related thaumatin superfamily protein... 0.02 Orthogroups_2024-Update
HORVU4Hr1G063690.3 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_10433421g0010 No alias (at5g40020 : 249.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
Potri.012G004800 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G039200 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G075500 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Solyc01g111330 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc02g083790 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g033490 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen01g053380 No alias Thaumatin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 39 235
No external refs found!