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  5. PSME_00042622-RA

PSME_00042622-RA


Description : (original description: no original description)


Gene families : OG_42_0000490 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042622-RA
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G054870.4 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10265000g0010 No alias (original description: no original description) 0.05 Orthogroups_2024-Update
MA_1922g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_224412g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Mp8g14700.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00028863-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00042623-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
Sobic.001G400700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G400800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G401200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G401300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 1 157
No external refs found!