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  5. PSME_00042678-RA

PSME_00042678-RA


Description : (at5g25610 : 225.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 92.8) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 450.0) & (original description: no original description)


Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042678-RA
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At5g25610 No alias BURP domain protein RD22 [Source:UniProtKB/Swiss-Prot;Acc:Q08298] 0.03 Orthogroups_2024-Update
MA_10182290g0010 No alias (at5g25610 : 84.3) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update
PSME_00024956-RA No alias (at5g25610 : 168.0) responsive to dehydration 22 (RD22)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 194 406
No external refs found!