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  5. PSME_00042744-RA

PSME_00042744-RA


Description : (q39654|psal_cucsa : 242.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Cucumis sativus (Cucumber) & (at4g12800 : 237.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)


Gene families : OG_42_0005223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042744-RA
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
A4A49_31898 No alias photosystem i reaction center subunit xi, chloroplastic 0.06 Orthogroups_2024-Update
A4A49_31899 No alias photosystem i reaction center subunit xi, chloroplastic 0.05 Orthogroups_2024-Update
At4g12800 No alias photosystem I subunit l [Source:TAIR;Acc:AT4G12800] 0.05 Orthogroups_2024-Update
Bradi4g08020 No alias photosystem I subunit l 0.03 Orthogroups_2024-Update
Brara.D00751.1 No alias component *(PsaL) of PS-I complex 0.07 Orthogroups_2024-Update
Brara.H00553.1 No alias component *(PsaL) of PS-I complex 0.08 Orthogroups_2024-Update
Cre12.g486300 No alias photosystem I subunit l 0.08 Orthogroups_2024-Update
Glyma.09G250800 No alias photosystem I subunit l 0.04 Orthogroups_2024-Update
Glyma.18G241700 No alias photosystem I subunit l 0.06 Orthogroups_2024-Update
HORVU3Hr1G009210.1 No alias component *(PsaL) of PS-I complex 0.03 Orthogroups_2024-Update
Kfl00881_0040 kfl00881_0040_v1.1 (q39654|psal_cucsa : 203.0) Photosystem I reaction... 0.1 Orthogroups_2024-Update
LOC_Os12g23200 No alias photosystem I reaction center subunit XI, chloroplast... 0.03 Orthogroups_2024-Update
MA_4125382g0010 No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
Mp7g18150.1 No alias component PsaL of PS-I complex 0.07 Orthogroups_2024-Update
Potri.014G175600 No alias photosystem I subunit l 0.03 Orthogroups_2024-Update
Pp1s15_408V6 No alias photosystem i reaction center subunit xi 0.11 Orthogroups_2024-Update
Pp1s41_267V6 No alias photosystem i reaction center subunit xi 0.06 Orthogroups_2024-Update
Pp1s54_165V6 No alias photosystem i reaction center subunit xi 0.09 Orthogroups_2024-Update
Seita.3G304000.1 No alias component *(PsaL) of PS-I complex 0.05 Orthogroups_2024-Update
Sobic.003G052500.1 No alias component *(PsaL) of PS-I complex 0.08 Orthogroups_2024-Update
Solyc06g082940 No alias Photosystem I reaction center subunit XI (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Solyc06g082950 No alias Photosystem I reaction center subunit XI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen06g034330 No alias Photosystem I reaction centre subunit XI 0.05 Orthogroups_2024-Update
Sopen06g034340 No alias Photosystem I reaction centre subunit XI 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003757 PSI_PsaL 77 228
No external refs found!