PSME_00042896-RA

Description : (at3g62700 : 1204.0) member of MRP subfamily; multidrug resistance-associated protein 10 (MRP10); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 4 (TAIR:AT2G47800.1); Has 708251 Blast hits to 364353 proteins in 4024 species: Archae - 13144; Bacteria - 571430; Metazoa - 13503; Fungi - 8752; Plants - 6721; Viruses - 16; Other Eukaryotes - 94685 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 89.7) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2408.0) & (original description: no original description)

Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00042896-RA
Cluster	HCCA clusters: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
147933	No alias	multidrug resistance-associated protein 4	0.03	Orthogroups_2024-Update
163772	No alias	multidrug resistance-associated protein 5	0.02	Orthogroups_2024-Update
402326	No alias	multidrug resistance-associated protein 5	0.03	Orthogroups_2024-Update
409191	No alias	multidrug resistance-associated protein 6	0.03	Orthogroups_2024-Update
81581	No alias	multidrug resistance-associated protein 2	0.02	Orthogroups_2024-Update
At1g30410	No alias	multidrug resistance-associated protein 13...	0.03	Orthogroups_2024-Update
Bradi1g48670	No alias	multidrug resistance-associated protein 14	0.04	Orthogroups_2024-Update
Bradi2g00417	No alias	multidrug resistance-associated protein 3	0.04	Orthogroups_2024-Update
Bradi2g04577	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
Bradi5g03460	No alias	multidrug resistance-associated protein 10	0.02	Orthogroups_2024-Update
Brara.G01873.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Kfl00342_0130	kfl00342_0130_v1.1	(at1g30420 : 405.0) member of MRP subfamily; multidrug...	0.02	Orthogroups_2024-Update
LOC_Os04g13210	No alias	multidrug resistance-associated protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g10730	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.03	Orthogroups_2024-Update
Mp4g11930.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
Potri.001G362300	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
Potri.003G182601	No alias	multidrug resistance-associated protein 11	0.03	Orthogroups_2024-Update
Potri.003G197200	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
Potri.014G180100	No alias	multidrug resistance-associated protein 9	0.04	Orthogroups_2024-Update
Potri.015G023800	No alias	multidrug resistance-associated protein 14	0.03	Orthogroups_2024-Update
Pp1s223_76V6	No alias	multidrug resistance protein abc transporter family	0.02	Orthogroups_2024-Update
Pp1s224_120V6	No alias	multidrug resistance protein abc transporter family	0.02	Orthogroups_2024-Update
Pp1s402_25V6	No alias	atp-binding sub-family c (cftr mrp) member 4	0.02	Orthogroups_2024-Update
Seita.9G446600.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Sobic.010G169000.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Sopen03g003490	No alias	ABC transporter	0.01	Orthogroups_2024-Update
Sopen09g029840	No alias	ABC transporter transmembrane region	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
CC	GO:0005777	peroxisome	IEP	Predicted GO
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009062	fatty acid catabolic process	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
BP	GO:0016054	organic acid catabolic process	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019395	fatty acid oxidation	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034440	lipid oxidation	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
BP	GO:0044242	cellular lipid catabolic process	IEP	Predicted GO
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	664	796
IPR011527	ABC1_TM_dom	337	600
IPR011527	ABC1_TM_dom	960	1203

External Links

No external refs found!

PSME_00042896-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation