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  5. PSME_00042954-RA

PSME_00042954-RA


Description : (at4g34370 : 361.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G16090.1). & (reliability: 650.0) & (original description: no original description)


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042954-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
PSME_00007947-RA No alias (at4g34370 : 140.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc... 0.05 Orthogroups_2024-Update
PSME_00011911-RA No alias (at2g16090 : 157.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.04 Orthogroups_2024-Update
PSME_00028716-RA No alias (at2g16090 : 537.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.01 Orthogroups_2024-Update
PSME_00033988-RA No alias (at4g34370 : 209.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc... 0.04 Orthogroups_2024-Update
PSME_00053150-RA No alias (at1g65430 : 230.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
PSME_00055713-RA No alias (at1g65430 : 382.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Sobic.005G208700.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 3 49
IPR002867 IBR_dom 66 105
No external refs found!