1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00042979-RA

PSME_00042979-RA


Description : (at3g14360 : 180.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description)


Gene families : OG_42_0000603 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042979-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi2g35450 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
PSME_00006667-RA No alias (at3g14360 : 397.0) alpha/beta-Hydrolases superfamily... 0.01 Orthogroups_2024-Update
Potri.014G027800 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 47 206
No external refs found!