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  5. PSME_00043015-RA

PSME_00043015-RA


Description : (at2g28500 : 127.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043015-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
At3g26620 No alias LOB domain-containing protein 23... 0.03 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.02 Orthogroups_2024-Update
Glyma.05G004400 No alias LOB domain-containing protein 25 0.04 Orthogroups_2024-Update
Glyma.06G178900 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.11G152333 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Glyma.11G164800 No alias Lateral organ boundaries (LOB) domain family protein 0.05 Orthogroups_2024-Update
Glyma.11G171564 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.11G232667 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.13G191000 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.02 Orthogroups_2024-Update
Glyma.14G202300 No alias LOB domain-containing protein 13 0.03 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.18G024400 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
LOC_Os01g07480 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00053746-RA No alias (at1g07900 : 130.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Potri.010G177100 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Potri.010G184400 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Pp1s13_89V6 No alias lob domain-containing 0.02 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.03 Orthogroups_2024-Update
Solyc11g008830 No alias Asymmetric leaves 2 (AHRD V3.3 *** A7L4B2_CARPA) 0.05 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008156 negative regulation of DNA replication IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0048478 replication fork protection IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051053 negative regulation of DNA metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 27 123
No external refs found!