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  5. PSME_00043048-RA

PSME_00043048-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043048-RA
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
153020 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
At1g16220 No alias Probable protein phosphatase 2C 6... 0.03 Orthogroups_2024-Update
Glyma.06G050900 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.18G283300 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G059130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G084080.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.013G012200 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Seita.3G273200.1 No alias clade E phosphatase 0.02 Orthogroups_2024-Update
Solyc10g076320 No alias Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!