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  5. PSME_00043120-RA

PSME_00043120-RA


Description : (at4g01130 : 177.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 139.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0000499 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043120-RA
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
PSME_00041367-RA No alias (at4g01130 : 286.0) GDSL-like Lipase/Acylhydrolase... 0.04 Orthogroups_2024-Update
PSME_00046695-RA No alias (at4g01130 : 150.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
Pp1s646_1V6 No alias F25P12.90; GDSL-motif lipase/hydrolase family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!