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  5. PSME_00043166-RA

PSME_00043166-RA


Description : (at1g06800 : 545.0) Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.; alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.1); Has 1442 Blast hits to 1434 proteins in 292 species: Archae - 0; Bacteria - 280; Metazoa - 45; Fungi - 278; Plants - 597; Viruses - 3; Other Eukaryotes - 239 (source: NCBI BLink). & (reliability: 1090.0) & (original description: no original description)


Gene families : OG_42_0000082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043166-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
A4A49_01141 No alias phospholipase a1-iidelta 0.03 Orthogroups_2024-Update
A4A49_15963 No alias phospholipase a1-igamma1, chloroplastic 0.02 Orthogroups_2024-Update
At2g30550 No alias Phospholipase A1-Igamma2, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi2g47970 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36540 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Brara.H00959.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Glyma.05G064200 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G110330.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Pp1s251_27V6 No alias lipase class 3 family protein 0.02 Orthogroups_2024-Update
Pp1s294_49V6 No alias triacylglycerol lipase 0.02 Orthogroups_2024-Update
Seita.3G063700.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Seita.3G137900.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
Solyc02g077000 No alias Phospholipase A1 (AHRD V3.3 *** A5YW95_CAPAN) 0.03 Orthogroups_2024-Update
Solyc09g065890 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Solyc11g065530 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g021960 No alias Lipase (class 3) 0.07 Orthogroups_2024-Update
Sopen02g022340 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 220 380
No external refs found!