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  5. PSME_00043171-RA

PSME_00043171-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043171-RA
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G215200 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Glyma.09G159700 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Glyma.09G159900 No alias Plant protein of unknown function (DUF247) 0.07 Orthogroups_2024-Update
MA_10436979g0010 No alias (at3g02645 : 216.0) Plant protein of unknown function... 0.07 Orthogroups_2024-Update
MA_15802g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_301279g0010 No alias (at3g02645 : 264.0) Plant protein of unknown function... 0.04 Orthogroups_2024-Update
PSME_00055140-RA No alias (at3g02645 : 294.0) Plant protein of unknown function... 0.05 Orthogroups_2024-Update
Potri.017G062900 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.017G124100 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Sobic.004G083900.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 11 239
No external refs found!