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  5. PSME_00043336-RA

PSME_00043336-RA


Description : (at4g20140 : 343.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 283.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 620.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043336-RA
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
93690 No alias Protein kinase superfamily protein 0.01 Orthogroups_2024-Update
Bradi1g01985 No alias EF-TU receptor 0.02 Orthogroups_2024-Update
Bradi1g32160 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g11740 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.05G126400 No alias Leucine-rich repeat transmembrane protein kinase 0.02 Orthogroups_2024-Update
Glyma.13G371200 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
LOC_Os01g05870 No alias receptor kinase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g03210 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g07180 No alias receptor protein kinase CLAVATA1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428901g0010 No alias (at2g24130 : 511.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_10430058g0010 No alias (at3g11080 : 114.0) receptor like protein 35 (RLP35);... 0.04 Orthogroups_2024-Update
MA_150750g0010 No alias (at3g47110 : 429.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_160382g0020 No alias (at2g24130 : 338.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_176471g0010 No alias (at1g25320 : 142.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
MA_189242g0010 No alias (at1g25320 : 81.6) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_266307g0020 No alias (at3g47570 : 279.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
MA_63760g0010 No alias (at5g20480 : 158.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
MA_723275g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_738611g0010 No alias (at1g25320 : 101.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_93312g0010 No alias (at3g47570 : 161.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_948744g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Mp4g03710.1 No alias LRR receptor-like serine/threonine-protein kinase GSO2... 0.02 Orthogroups_2024-Update
PSME_00002800-RA No alias (at3g47110 : 604.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00008690-RA No alias (at3g47570 : 218.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00014024-RA No alias (at2g24130 : 458.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00015358-RA No alias (at5g20480 : 637.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00018686-RA No alias (at3g47110 : 573.0) Leucine-rich repeat protein kinase... 0.06 Orthogroups_2024-Update
PSME_00027031-RA No alias (at3g47570 : 470.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00030106-RA No alias (at3g47110 : 609.0) Leucine-rich repeat protein kinase... 0.01 Orthogroups_2024-Update
PSME_00030826-RA No alias (at2g24130 : 523.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00034088-RA No alias (at3g47110 : 624.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00039609-RA No alias (at2g24130 : 270.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00039997-RA No alias (at2g24130 : 449.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.06 Orthogroups_2024-Update
PSME_00042816-RA No alias (at2g24130 : 468.0) Leucine-rich receptor-like protein... 0.01 Orthogroups_2024-Update
PSME_00044948-RA No alias (at3g47110 : 644.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00046894-RA No alias (at5g46330 : 162.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
PSME_00048068-RA No alias (at3g47570 : 520.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00049305-RA No alias (at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00049438-RA No alias (at3g47570 : 582.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00055531-RA No alias (at5g46330 : 107.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00055909-RA No alias (at3g47110 : 624.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
Potri.005G117700 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.006G181200 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Pp1s40_196V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Seita.4G046400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.5G106800.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G067600.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.003G069601.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.003G070025.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.004G288200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.008G007400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.008G174966.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.01 Orthogroups_2024-Update
Solyc02g068880 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc03g118330 No alias Receptor-kinase, putative (AHRD V3.3 *-* B9RVA8_RICCO) 0.03 Orthogroups_2024-Update
Solyc06g006020 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 331 370
IPR001611 Leu-rich_rpt 672 730
IPR001611 Leu-rich_rpt 937 979
IPR001611 Leu-rich_rpt 812 848
IPR001611 Leu-rich_rpt 448 507
No external refs found!