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  5. PSME_00043367-RA

PSME_00043367-RA


Description : (at5g63810 : 100.0) member of Glycoside Hydrolase Family 35; beta-galactosidase 10 (BGAL10); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2086 Blast hits to 2065 proteins in 466 species: Archae - 15; Bacteria - 851; Metazoa - 358; Fungi - 207; Plants - 597; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p49676|bgal_braol : 90.9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (reliability: 200.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043367-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_18578 No alias beta-galactosidase 1 0.04 Orthogroups_2024-Update
A4A49_28636 No alias beta-galactosidase 8 0.02 Orthogroups_2024-Update
A4A49_36090 No alias beta-galactosidase 16 0.01 Orthogroups_2024-Update
At2g04060 No alias Glycosyl hydrolase family 35 protein... 0.01 Orthogroups_2024-Update
At2g32810 No alias Beta-galactosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV3] 0.01 Orthogroups_2024-Update
Bradi2g56607 No alias beta-galactosidase 10 0.06 Orthogroups_2024-Update
Brara.E02743.1 No alias beta-galactosidase *(BGAL1) 0.01 Orthogroups_2024-Update
GRMZM2G073584 No alias beta galactosidase 9 0.01 Orthogroups_2024-Update
GRMZM2G130375 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
GRMZM2G162238 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
Glyma.12G032600 No alias glycosyl hydrolase family 35 protein 0.03 Orthogroups_2024-Update
Glyma.13G350700 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.15G023800 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Glyma.16G083700 No alias beta-galactosidase 7 0.01 Orthogroups_2024-Update
Glyma.16G131800 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G050450.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_207283g0010 No alias (at2g28470 : 282.0) putative beta-galactosidase (BGAL8... 0.07 Orthogroups_2024-Update
MA_72251g0010 No alias (at2g28470 : 966.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
PSME_00000669-RA No alias (at2g28470 : 320.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
PSME_00000674-RA No alias (at2g28470 : 964.0) putative beta-galactosidase (BGAL8... 0.02 Orthogroups_2024-Update
PSME_00008386-RA No alias (at2g28470 : 875.0) putative beta-galactosidase (BGAL8... 0.02 Orthogroups_2024-Update
PSME_00010900-RA No alias (at2g32810 : 114.0) putative beta-galactosidase; beta... 0.04 Orthogroups_2024-Update
Seita.3G302400.1 No alias beta-galactosidase *(BGAL9) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.008G052200.1 No alias beta-galactosidase *(BGAL9) & EC_3.2 glycosylase 0.01 Orthogroups_2024-Update
Solyc03g121540 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Solyc12g044880 No alias ss-galactosidase, clone tEG1B 0.02 Orthogroups_2024-Update
Sopen02g023760 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen03g029730 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen06g022060 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!