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  5. PSME_00043371-RA

PSME_00043371-RA


Description : (at5g21482 : 461.0) This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.; cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink). & (q9t0n8|ckx1_maize : 379.0) Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12) (Cytokinin oxidase 1) (CKO 1) (COX 1) (ZmCKX1) - Zea mays (Maize) & (reliability: 922.0) & (original description: no original description)


Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043371-RA
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Brara.B00939.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.02 Orthogroups_2024-Update
PSME_00046144-RA No alias (at5g21482 : 395.0) This gene used to be called AtCKX5.... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009690 cytokinin metabolic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0019139 cytokinin dehydrogenase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR015345 Cytokinin_DH_FAD/cytokin-bd 195 473
IPR006094 Oxid_FAD_bind_N 22 163
No external refs found!