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  5. PSME_00043417-RA

PSME_00043417-RA


Description : (at5g24400 : 241.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)


Gene families : OG_42_0001274 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043417-RA
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
A4A49_62183 No alias putative 6-phosphogluconolactonase 5, chloroplastic 0.02 Orthogroups_2024-Update
Brara.F00916.1 No alias 6-phosphogluconolactonase & EC_3.1 hydrolase acting on ester bond 0.03 Orthogroups_2024-Update
LOC_Os09g35970 No alias 6-phosphogluconolactonase, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006148 Glc/Gal-6P_isomerase 14 194
No external refs found!