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  5. PSME_00043469-RA

PSME_00043469-RA


Description : (at4g05190 : 325.0) ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.; kinesin 5 (ATK5); FUNCTIONS IN: microtubule motor activity; INVOLVED IN: spindle assembly, microtubule cytoskeleton organization; LOCATED IN: spindle microtubule, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 92441 Blast hits to 53030 proteins in 2518 species: Archae - 977; Bacteria - 10764; Metazoa - 46004; Fungi - 8189; Plants - 5583; Viruses - 252; Other Eukaryotes - 20672 (source: NCBI BLink). & (p46869|fla10_chlre : 151.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 650.0) & (original description: no original description)


Gene families : OG_42_0000091 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043469-RA
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
MA_10436275g0010 No alias (at4g05190 : 746.0) ATK5 encodes a kinesin protein... 0.03 Orthogroups_2024-Update
MA_93408g0010 No alias (at5g54670 : 152.0) Encodes a truncated KatC polypeptide... 0.04 Orthogroups_2024-Update
PSME_00030296-RA No alias (at3g44730 : 220.0) kinesin-like protein 1 (KP1);... 0.04 Orthogroups_2024-Update
Potri.011G165200 No alias kinesin-like protein 1 0.02 Orthogroups_2024-Update
Seita.J002300.1 No alias microtubule-based motor protein *(Kinesin-14) &... 0.03 Orthogroups_2024-Update
Sopen01g042550 No alias Kinesin motor domain 0.02 Orthogroups_2024-Update
Sopen09g030270 No alias Kinesin motor domain 0.02 Orthogroups_2024-Update
Sopen12g001240 No alias Kinesin motor domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0007018 microtubule-based movement IEA InterProScan predictions
MF GO:0008017 microtubule binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 58 257
No external refs found!