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  5. PSME_00043472-RA

PSME_00043472-RA


Description : (at1g15950 : 415.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51108|dfra_maize : 205.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 830.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043472-RA
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G012470.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_137109g0010 No alias (at1g15950 : 414.0) Encodes a cinnamoyl CoA reductase.... 0.04 Orthogroups_2024-Update
PSME_00038843-RA No alias (at5g42800 : 216.0) dihydroflavonol reductase. Catalyzes... 0.04 Orthogroups_2024-Update
PSME_00042205-RA No alias (at1g15950 : 432.0) Encodes a cinnamoyl CoA reductase.... 0.02 Orthogroups_2024-Update
Potri.009G076300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G147600.1 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
Seita.4G048300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc01g008540 No alias Cinnamoyl CoA reductase-like protein (AHRD V1 ***- B9HNY0_POPTR) 0.02 Orthogroups_2024-Update
Sopen03g035840 No alias NAD dependent epimerase/dehydratase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 9 246
No external refs found!