1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00043548-RA

PSME_00043548-RA


Description : (at5g16010 : 219.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)


Gene families : OG_42_0001961 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043548-RA
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Mp4g19760.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.3... 0.02 Orthogroups_2024-Update
Potri.008G012800 No alias 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0.03 Orthogroups_2024-Update
Pp1s340_21V6 No alias steroid alpha reductase family protein 0.02 Orthogroups_2024-Update
Seita.2G039700.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001104 3-oxo-5_a-steroid_4-DH_C 283 377
IPR001104 3-oxo-5_a-steroid_4-DH_C 550 668
No external refs found!