Description : (p35683|if4a_orysa : 721.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 709.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1418.0) & (original description: no original description)
Gene families : OG_42_0000623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000623_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00043687-RA | |
Cluster | HCCA clusters: Cluster_175 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.G03149.1 | No alias | mRNA unwinding factor *(eIF4A)) | 0.04 | Orthogroups_2024-Update | |
GRMZM2G028366 | No alias | eif4a-2 | 0.03 | Orthogroups_2024-Update | |
Glyma.07G007400 | No alias | eif4a-2 | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006090 | pyruvate metabolic process | IEP | Predicted GO |
BP | GO:0006096 | glycolytic process | IEP | Predicted GO |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predicted GO |
BP | GO:0006486 | protein glycosylation | IEP | Predicted GO |
BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Predicted GO |
BP | GO:0006757 | ATP generation from ADP | IEP | Predicted GO |
BP | GO:0009056 | catabolic process | IEP | Predicted GO |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009166 | nucleotide catabolic process | IEP | Predicted GO |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predicted GO |
BP | GO:0043413 | macromolecule glycosylation | IEP | Predicted GO |
BP | GO:0046031 | ADP metabolic process | IEP | Predicted GO |
BP | GO:0046434 | organophosphate catabolic process | IEP | Predicted GO |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Predicted GO |
BP | GO:0070085 | glycosylation | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Predicted GO |
BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
No external refs found! |