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Description : (at1g09560 : 232.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 218.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 420.0) & (original description: no original description)
Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00043689-RA | |
| Cluster | HCCA clusters: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 109767 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 109995 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 229376 | No alias | RmlC-like cupins superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 229747 | No alias | germin-like protein 5 | 0.02 | Orthogroups_2024-Update | |
| 270502 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 271728 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 92738 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_08369 | No alias | nectarin-1 | 0.04 | Orthogroups_2024-Update | |
| A4A49_13720 | No alias | nectarin-1 | 0.05 | Orthogroups_2024-Update | |
| A4A49_22863 | No alias | germin-like protein subfamily 1 member 20 | 0.03 | Orthogroups_2024-Update | |
| A4A49_64273 | No alias | nectarin-1 | 0.04 | Orthogroups_2024-Update | |
| At3g05930 | No alias | Germin-like protein subfamily 2 member 3... | 0.07 | Orthogroups_2024-Update | |
| Bradi1g04907 | No alias | germin-like protein subfamily 2 member 2 precursor | 0.03 | Orthogroups_2024-Update | |
| Bradi2g08790 | No alias | germin-like protein 10 | 0.03 | Orthogroups_2024-Update | |
| Bradi2g11050 | No alias | germin-like protein subfamily 2 member 2 precursor | 0.02 | Orthogroups_2024-Update | |
| Bradi2g60870 | No alias | germin-like protein subfamily 2 member 2 precursor | 0.09 | Orthogroups_2024-Update | |
| Bradi3g44880 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g21910 | No alias | RmlC-like cupins superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Brara.G01448.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I04761.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G007700 | No alias | germin-like protein 1 | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G023590.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G005540.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G090190.4 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G066380.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Kfl00516_0040 | kfl00516_0040_v1.... | (at3g62020 : 122.0) germin-like protein (GLP10);... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g18170 | No alias | Cupin domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g32980 | No alias | Cupin domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g08960 | No alias | Cupin domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g09060 | No alias | Cupin domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g09080 | No alias | Cupin domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g35760 | No alias | Cupin domain containing protein, expressed | 0.05 | Orthogroups_2024-Update | |
| PSME_00030115-RA | No alias | (at1g09560 : 257.0) germin-like protein (GLP5);... | 0.04 | Orthogroups_2024-Update | |
| PSME_00042213-RA | No alias | (at1g09560 : 119.0) germin-like protein (GLP5);... | 0.05 | Orthogroups_2024-Update | |
| PSME_00054465-RA | No alias | (at1g09560 : 210.0) germin-like protein (GLP5);... | 0.06 | Orthogroups_2024-Update | |
| Potri.001G464500 | No alias | germin-like protein 2 | 0.03 | Orthogroups_2024-Update | |
| Potri.011G162200 | No alias | RmlC-like cupins superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.013G051600 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.019G026000 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s82_6V6 | No alias | F14J9.22; germin-like protein (GLP4) (GLP5) [Arabidopsis... | 0.03 | Orthogroups_2024-Update | |
| Seita.6G174100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.7G238900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.003G427900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G148100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G066808.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.007G067108.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.007G067608.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sopen01g044840 | No alias | Cupin | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0045735 | nutrient reservoir activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0008061 | chitin binding | IEP | Predicted GO |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006045 | Cupin_1 | 67 | 212 |
| No external refs found! |