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  5. PSME_00043719-RA

PSME_00043719-RA


Description : (at3g09510 : 83.2) Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 1469 Blast hits to 1446 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1468; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)


Gene families : OG_42_0002280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043719-RA
Cluster HCCA clusters: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
PSME_00005771-RA No alias (at1g24090 : 99.8) RNase H family protein; FUNCTIONS IN:... 0.06 Orthogroups_2024-Update
PSME_00019861-RA No alias (at1g24090 : 97.1) RNase H family protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 75 142
No external refs found!