Description : (at1g12220 : 228.0) Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.; RESISTANT TO P. SYRINGAE 5 (RPS5); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G12280.1). & (reliability: 456.0) & (original description: no original description)
Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00043732-RA | |
Cluster | HCCA clusters: Cluster_230 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.F00299.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.12G218500 | No alias | LRR and NB-ARC domains-containing disease resistance protein | 0.05 | Orthogroups_2024-Update | |
MA_10321737g0010 | No alias | (at5g05400 : 123.0) LRR and NB-ARC domains-containing... | 0.04 | Orthogroups_2024-Update | |
MA_10436684g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
MA_355252g0010 | No alias | (at4g26090 : 192.0) Encodes a plasma membrane protein... | 0.03 | Orthogroups_2024-Update | |
MA_674039g0010 | No alias | (at5g63020 : 154.0) Disease resistance protein... | 0.03 | Orthogroups_2024-Update | |
MA_9432601g0010 | No alias | (at5g63020 : 105.0) Disease resistance protein... | 0.06 | Orthogroups_2024-Update | |
PSME_00056632-RA | No alias | (at1g61310 : 186.0) LRR and NB-ARC domains-containing... | 0.03 | Orthogroups_2024-Update | |
Potri.T027200 | No alias | NB-ARC domain-containing disease resistance protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0043531 | ADP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003333 | amino acid transmembrane transport | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006865 | amino acid transport | IEP | Predicted GO |
BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002182 | NB-ARC | 141 | 383 |
No external refs found! |