1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00043737-RA

PSME_00043737-RA


Description : (at3g51670 : 280.0) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 2976 Blast hits to 2970 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 1096; Fungi - 761; Plants - 842; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)


Gene families : OG_42_0000535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000535_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043737-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_08249 No alias patellin-3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 240 376
IPR011074 CRAL/TRIO_N_dom 172 215
No external refs found!