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Description : (at1g67750 : 590.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 403.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1180.0) & (original description: no original description)
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00043773-RA | |
| Cluster | HCCA clusters: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 407495 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_12542 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| A4A49_23917 | No alias | putative pectate lyase 13 | 0.02 | Orthogroups_2024-Update | |
| A4A49_40134 | No alias | putative pectate lyase p59 | 0.02 | Orthogroups_2024-Update | |
| At3g24230 | No alias | Probable pectate lyase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRM5] | 0.03 | Orthogroups_2024-Update | |
| At3g54920 | No alias | Probable pectate lyase 13... | 0.03 | Orthogroups_2024-Update | |
| At5g48900 | No alias | Probable pectate lyase 20... | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G112600 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g05260 | No alias | pectate lyase precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_101171g0010 | No alias | (at1g67750 : 487.0) Pectate lyase family protein;... | 0.05 | Orthogroups_2024-Update | |
| MA_10426822g0020 | No alias | (at1g67750 : 481.0) Pectate lyase family protein;... | 0.05 | Orthogroups_2024-Update | |
| MA_10430145g0030 | No alias | (at4g13210 : 482.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_10437227g0010 | No alias | (at4g24780 : 367.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_203992g0010 | No alias | (at4g24780 : 544.0) Pectin lyase-like superfamily... | 0.05 | Orthogroups_2024-Update | |
| MA_91467g0010 | No alias | (at4g24780 : 570.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_97947g0010 | No alias | (at1g67750 : 510.0) Pectate lyase family protein;... | 0.05 | Orthogroups_2024-Update | |
| PSME_00005706-RA | No alias | (at3g07010 : 518.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
| PSME_00009672-RA | No alias | (at5g48900 : 608.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
| PSME_00012211-RA | No alias | (at5g63180 : 515.0) Pectin lyase-like superfamily... | 0.05 | Orthogroups_2024-Update | |
| PSME_00019558-RA | No alias | (at4g13710 : 625.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
| Potri.001G052300 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.011G008100 | No alias | root hair specific 14 | 0.04 | Orthogroups_2024-Update | |
| Seita.4G033100.1 | No alias | EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Solyc03g071570 | No alias | Pectate lyase (AHRD V3.3 *** K4BHI7_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g033960 | No alias | Pectate lyase | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| MF | GO:0008378 | galactosyltransferase activity | IEP | Predicted GO |
| BP | GO:0009611 | response to wounding | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 185 | 369 |
| No external refs found! |