PSME_00043807-RA


Description : (at1g09540 : 265.0) Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.; myb domain protein 61 (MYB61); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8976 Blast hits to 8269 proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa - 766; Fungi - 514; Plants - 5880; Viruses - 4; Other Eukaryotes - 1812 (source: NCBI BLink). & (p20027|myb3_horvu : 211.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 530.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043807-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_38619 No alias transcription factor myb86 0.02 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.05 Orthogroups_2024-Update
GRMZM2G088189 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
GRMZM2G167088 No alias myb domain protein 101 0.05 Orthogroups_2024-Update
GRMZM2G496770 No alias myb domain protein 19 0.02 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.02 Orthogroups_2024-Update
Glyma.20G117000 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
LOC_Os01g74410 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_20462g0010 No alias (at2g32460 : 219.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00002485-RA No alias (at3g61250 : 260.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00030703-RA No alias (p10290|mybc_maize : 187.0) Anthocyanin regulatory C1... 0.04 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.05 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.06 Orthogroups_2024-Update
Potri.001G075400 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.017G130300 No alias myb domain protein 43 0.02 Orthogroups_2024-Update
Seita.6G154200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.02 Orthogroups_2024-Update
Sobic.006G159100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.02 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 167 210
IPR001005 SANT/Myb 114 161
No external refs found!