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  5. PSME_00043880-RA

PSME_00043880-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043880-RA
Cluster HCCA clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
PSME_00000639-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00010264-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00036004-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00037762-RA No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
PSME_00039025-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00041372-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00045234-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00046055-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00048494-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00048826-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 404 471
No external refs found!