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  5. PSME_00043973-RA

PSME_00043973-RA


Description : (at1g22640 : 191.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20025|myb38_maize : 177.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 346.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043973-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
109587 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.03 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
AC217264.3_FG005 No alias myb domain protein 101 0.02 Orthogroups_2024-Update
At1g09540 No alias MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4] 0.03 Orthogroups_2024-Update
At1g18570 No alias Transcription factor MYB51... 0.03 Orthogroups_2024-Update
At1g57560 No alias At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695] 0.04 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.02 Orthogroups_2024-Update
At5g14750 No alias WER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1] 0.03 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Bradi3g37047 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.06 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.A03255.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.A03909.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03610.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Brara.D01882.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.E00050.1 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.G00519.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G01913.1 No alias accessory protein (LMI2) of floral meristem identity control 0.02 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.J02139.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G081557 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
GRMZM2G119693 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
GRMZM2G160840 No alias myb domain protein 78 0.03 Orthogroups_2024-Update
GRMZM2G169356 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.01G004900 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.05 Orthogroups_2024-Update
Glyma.02G009800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.05G234600 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Glyma.06G160500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.06G188400 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.06G299900 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.02 Orthogroups_2024-Update
Glyma.07G228600 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.08G168100 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Glyma.10G139000 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Glyma.17G232220 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
HORVU5Hr1G021750.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G022690.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_140579g0010 No alias (at1g22640 : 213.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.04 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.04 Orthogroups_2024-Update
MA_62361g0010 No alias (at1g66230 : 237.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_7261g0010 No alias (at3g12720 : 147.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_80033g0010 No alias (at5g65790 : 232.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.11 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.06 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00014838-RA No alias (at3g12720 : 234.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.05 Orthogroups_2024-Update
PSME_00026563-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00036270-RA No alias (at5g65790 : 241.0) Encodes a putative MYB transcription... 0.04 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00041780-RA No alias (at4g38620 : 265.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.06 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.05 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.07 Orthogroups_2024-Update
PSME_00052622-RA No alias (at3g02940 : 204.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.001G086700 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.001G346600 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Potri.001G408700 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.003G189700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Potri.004G215100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.006G066400 No alias myb domain protein 82 0.03 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.04 Orthogroups_2024-Update
Potri.007G067600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Potri.015G067700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G143500 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.017G130300 No alias myb domain protein 43 0.02 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.1G117000.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Seita.1G281500.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G161500.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G388700.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G183800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.04 Orthogroups_2024-Update
Sobic.004G303400.1 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
Sobic.004G303600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.04 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G142000.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G031900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G032000.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Solyc05g053330 No alias MYB transcription factor (AHRD V3.3 *** Q39550_CRAPL) 0.03 Orthogroups_2024-Update
Solyc10g005460 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.02 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen02g036550 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!