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  5. PSME_00043976-RA

PSME_00043976-RA


Description : (at5g02010 : 363.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 726.0) & (original description: no original description)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043976-RA
Cluster HCCA clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
Brara.E00883.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
PSME_00055388-RA No alias (at5g05940 : 89.0) Encodes a member of KPP-like gene... 0.04 Orthogroups_2024-Update
Potri.014G084200 No alias RHO guanyl-nucleotide exchange factor 3 0.03 Orthogroups_2024-Update
Seita.3G221100.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 2 253
No external refs found!