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  5. PSME_00044126-RA

PSME_00044126-RA


Description : (at2g26870 : 657.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 1314.0) & (original description: no original description)


Gene families : OG_42_0000859 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044126-RA
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
At3g48610 No alias Non-specific phospholipase C6... 0.02 Orthogroups_2024-Update
MA_217446g0010 No alias (at2g26870 : 638.0) non-specific phospholipase C2... 0.03 Orthogroups_2024-Update
MA_46249g0010 No alias (at3g48610 : 495.0) non-specific phospholipase C6... 0.03 Orthogroups_2024-Update
Pp1s282_70V6 No alias F10K1.6; phosphoesterase family protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007312 Phosphoesterase 7 367
No external refs found!