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  5. Sopen06g011360

Sopen06g011360


Description : PPR repeat


Gene families : OG_42_0012067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g011360
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G261902 No alias SLOW GROWTH 1 0.02 Orthogroups_2024-Update
Solyc06g035600 No alias Pentatricopeptide repeat-containing protein, putative... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 180 209
IPR002885 Pentatricopeptide_repeat 150 178
IPR002885 Pentatricopeptide_repeat 486 509
IPR002885 Pentatricopeptide_repeat 80 109
IPR002885 Pentatricopeptide_repeat 410 458
IPR002885 Pentatricopeptide_repeat 310 358
IPR002885 Pentatricopeptide_repeat 279 307
No external refs found!