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  5. PSME_00044155-RA

PSME_00044155-RA


Description : (p20025|myb38_maize : 209.0) Myb-related protein Zm38 - Zea mays (Maize) & (at4g38620 : 206.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044155-RA
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
A4A49_24145 No alias transcription factor myb108 0.03 Orthogroups_2024-Update
Brara.F01573.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
MA_10429682g0010 No alias (p20026|myb1_horvu : 172.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_8626g0010 No alias (at1g22640 : 166.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00005364-RA No alias (at1g22640 : 189.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00018833-RA No alias (p20025|myb38_maize : 246.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00024333-RA No alias (at1g22640 : 197.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.04 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00036271-RA No alias (at5g57620 : 240.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00037500-RA No alias (p20025|myb38_maize : 252.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Sopen01g023280 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 111
IPR001005 SANT/Myb 14 61
No external refs found!