PSME_00044163-RA

Description : no hits & (original description: no original description)

Gene families : OG_42_0002538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002538_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00044163-RA
Cluster	HCCA clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os09g10580	No alias	expressed protein	0.02	Orthogroups_2024-Update
Mp3g15760.1	No alias	component NUF2 of NDC80 outer kinetochore complex	0.03	Orthogroups_2024-Update
PSME_00001043-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00021408-RA	No alias	(at1g61000 : 201.0) FUNCTIONS IN: molecular_function...	0.08	Orthogroups_2024-Update
Sopen10g008970	No alias	Nuf2 family	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031262	Ndc80 complex	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005549	Kinetochore_Nuf2	29	75

External Links

No external refs found!