PSME_00044295-RA

Description : (at4g23180 : 407.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8l4h4|nork_medtr : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 738.0) & (original description: no original description)

Gene families : OG_42_0000062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00044295-RA
Cluster	HCCA clusters: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
27379	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
At3g45860	No alias	Cysteine-rich receptor-like protein kinase 4...	0.04	Orthogroups_2024-Update
Bradi1g12377	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.04	Orthogroups_2024-Update
Bradi1g12397	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.02	Orthogroups_2024-Update
Bradi1g25552	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.02	Orthogroups_2024-Update
Bradi1g25657	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.02	Orthogroups_2024-Update
Bradi2g01937	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 41	0.04	Orthogroups_2024-Update
Bradi3g53070	No alias	S-locus lectin protein kinase family protein	0.03	Orthogroups_2024-Update
Brara.D00678.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Brara.I02812.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
GRMZM2G076943	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.02	Orthogroups_2024-Update
GRMZM2G134382	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.03	Orthogroups_2024-Update
Glyma.05G139500	No alias	Protein kinase superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G166700	No alias	Protein kinase superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G254300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.07	Orthogroups_2024-Update
Glyma.18G237900	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.03	Orthogroups_2024-Update
Glyma.20G137300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 26	0.02	Orthogroups_2024-Update
Glyma.20G138600	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.03	Orthogroups_2024-Update
Glyma.20G138700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.03	Orthogroups_2024-Update
Glyma.20G139200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.04	Orthogroups_2024-Update
Glyma.20G139700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.04	Orthogroups_2024-Update
Glyma.20G139900	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.06	Orthogroups_2024-Update
HORVU1Hr1G001220.3	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
HORVU1Hr1G074310.4	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
HORVU2Hr1G044640.4	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.05	Orthogroups_2024-Update
HORVU2Hr1G044680.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
LOC_Os02g48080	No alias	cysteine-rich receptor-like protein kinase 7 precursor,...	0.03	Orthogroups_2024-Update
LOC_Os07g35280	No alias	TKL_IRAK_DUF26-lc.1 - DUF26 kinases have homology to...	0.03	Orthogroups_2024-Update
LOC_Os07g35370	No alias	TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
LOC_Os07g35640	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os07g35660	No alias	TKL_IRAK_DUF26-lc.21 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
LOC_Os07g35740	No alias	TKL_IRAK_DUF26-ld.2 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
MA_104192g0010	No alias	(at4g23280 : 375.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
MA_169317g0010	No alias	(at4g23180 : 401.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
MA_28286g0010	No alias	(at4g23160 : 436.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
MA_285982g0010	No alias	(at1g70740 : 230.0) Protein kinase superfamily protein;...	0.03	Orthogroups_2024-Update
MA_8498773g0010	No alias	(at4g23180 : 291.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
MA_9524248g0010	No alias	(at4g23140 : 298.0) Arabidopsis thaliana receptor-like...	0.04	Orthogroups_2024-Update
MA_9861293g0010	No alias	(at1g70740 : 274.0) Protein kinase superfamily protein;...	0.04	Orthogroups_2024-Update
PSME_00001398-RA	No alias	(at4g23180 : 419.0) Encodes a receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00001402-RA	No alias	(at4g23280 : 388.0) Encodes a cysteine-rich...	0.06	Orthogroups_2024-Update
PSME_00017023-RA	No alias	(at4g23180 : 387.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00030110-RA	No alias	(at4g23310 : 238.0) Encodes a cysteine-rich...	0.04	Orthogroups_2024-Update
PSME_00040936-RA	No alias	(at4g23180 : 409.0) Encodes a receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00043326-RA	No alias	(at4g23180 : 419.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00044921-RA	No alias	no hits & (original description: no original description)	0.09	Orthogroups_2024-Update
PSME_00046993-RA	No alias	(at4g23180 : 277.0) Encodes a receptor-like protein...	0.05	Orthogroups_2024-Update
Potri.004G024500	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.05	Orthogroups_2024-Update
Potri.004G025650	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.05	Orthogroups_2024-Update
Potri.004G025800	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.05	Orthogroups_2024-Update
Potri.004G026200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.02	Orthogroups_2024-Update
Potri.004G026350	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.07	Orthogroups_2024-Update
Potri.012G055500	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.03	Orthogroups_2024-Update
Pp1s149_106V6	No alias	ac009894_9 serine threonine kinases	0.02	Orthogroups_2024-Update
Seita.2G201600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.2G341500.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.2G341700.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.05	Orthogroups_2024-Update
Seita.5G086900.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.002G197600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.002G327700.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.002G327800.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.002G328900.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.003G088100.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.005G175600.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.05	Orthogroups_2024-Update
Sobic.009G082200.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.010G137400.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Solyc02g080040	No alias	Receptor-like kinase (AHRD V3.3 *** G8A106_MEDTR)	0.03	Orthogroups_2024-Update
Sopen02g024790	No alias	Protein tyrosine kinase	0.03	Orthogroups_2024-Update
Sopen03g030670	No alias	Protein tyrosine kinase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0010167	response to nitrate	IEP	Predicted GO
BP	GO:0015706	nitrate transport	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO
BP	GO:1901698	response to nitrogen compound	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	360	560
IPR002902	GNK2	38	136
IPR002902	GNK2	168	259

External Links

No external refs found!

PSME_00044295-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation