Description : (at2g20750 : 200.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 193.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (reliability: 400.0) & (original description: no original description)
Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00044323-RA | |
Cluster | HCCA clusters: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GRMZM2G013002 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G013671 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G094990 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G342246 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
Glyma.13G298100 | No alias | expansin B3 | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G054230.7 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
MA_166764g0010 | No alias | (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... | 0.02 | Orthogroups_2024-Update | |
PSME_00003968-RA | No alias | (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... | 0.05 | Orthogroups_2024-Update | |
PSME_00022853-RA | No alias | (at2g20750 : 210.0) member of BETA-EXPANSINS. Naming... | 0.04 | Orthogroups_2024-Update | |
PSME_00024925-RA | No alias | (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... | 0.05 | Orthogroups_2024-Update | |
PSME_00039752-RA | No alias | (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004096 | catalase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
No external refs found! |