PSME_00044327-RA

Description : "(q7y1v5|c78ab_orysa : 580.0) Cytochrome P450 78A11 (EC 1.14.-.-) (Protein PLASTOCHRON1) - Oryza sativa (Rice) & (at5g09970 : 554.0) member of CYP78A; ""cytochrome P450, family 78, subfamily A, polypeptide 7"" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1108.0) & (original description: no original description)"

Gene families : OG_42_0000481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00044327-RA
Cluster	HCCA clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33745	No alias	cytochrome p450 78a5	0.03	Orthogroups_2024-Update
At2g46660	No alias	Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0]	0.02	Orthogroups_2024-Update
At3g61880	No alias	Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]	0.03	Orthogroups_2024-Update
Brara.F00917.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.03	Orthogroups_2024-Update
Brara.J02349.1	No alias	EC_1.14 oxidoreductase acting on paired donor with...	0.05	Orthogroups_2024-Update
Glyma.05G019200	No alias	cytochrome P450, family 78, subfamily A, polypeptide 10	0.02	Orthogroups_2024-Update
Glyma.19G240800	No alias	cytochrome P450, family 78, subfamily A, polypeptide 5	0.03	Orthogroups_2024-Update
Glyma.19G258700	No alias	cytochrome P450, family 78, subfamily A, polypeptide 6	0.03	Orthogroups_2024-Update
MA_12998g0010	No alias	"(o48927\|c78a3_soybn : 560.0) Cytochrome P450 78A3 (EC...	0.03	Orthogroups_2024-Update
MA_4302g0010	No alias	(q7y1v5\|c78ab_orysa : 165.0) Cytochrome P450 78A11 (EC...	0.04	Orthogroups_2024-Update
Sopen03g034020	No alias	Cytochrome P450	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEA	InterProScan predictions
MF	GO:0020037	heme binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001128	Cyt_P450	80	516

External Links

No external refs found!

PSME_00044327-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation