1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00044360-RA

PSME_00044360-RA


Description : (at4g39920 : 109.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)


Gene families : OG_42_0004449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044360-RA
Cluster HCCA clusters: Cluster_203


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012945 Tubulin-bd_cofactor_C_dom 132 184
No external refs found!