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  5. PSME_00044371-RA

PSME_00044371-RA


Description : (at3g30390 : 276.0) Encodes a putative amino acid transporter.; Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)


Gene families : OG_42_0000560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044371-RA
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_18590 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Cre02.g145750 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Glyma.02G260100 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Glyma.19G037500 No alias Transmembrane amino acid transporter family protein 0.04 Orthogroups_2024-Update
LOC_Os02g09810 No alias amino acid transporter, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g16420 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432714g0010 No alias (at3g30390 : 519.0) Encodes a putative amino acid... 0.03 Orthogroups_2024-Update
Sopen06g016480 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 45 270
No external refs found!