Description : (at1g69780 : 139.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)
Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00044411-RA | |
Cluster | HCCA clusters: Cluster_61 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi4g35910 | No alias | homeobox 7 | 0.02 | Orthogroups_2024-Update | |
Brara.G01475.1 | No alias | HD-ZIP I/II-type transcription factor | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G092710.2 | No alias | HD-ZIP I/II-type transcription factor | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G075180.3 | No alias | HD-ZIP I/II-type transcription factor | 0.02 | Orthogroups_2024-Update | |
PSME_00014719-RA | No alias | (at4g40060 : 125.0) Encodes a homeodomain leucine zipper... | 0.02 | Orthogroups_2024-Update | |
Sobic.004G251300.1 | No alias | HD-ZIP I/II-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.004G300300.1 | No alias | HD-ZIP I/II-type transcription factor | 0.01 | Orthogroups_2024-Update | |
Solyc01g096320 | No alias | Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC) | 0.02 | Orthogroups_2024-Update | |
Solyc09g008810 | No alias | Homeobox leucine zipper protein (AHRD V3.3 *** A0A072U315_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen03g032330 | No alias | Homeobox domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0046658 | anchored component of plasma membrane | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
No external refs found! |