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  5. PSME_00044444-RA

PSME_00044444-RA


Description : (at2g39650 : 170.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 340.0) & (original description: no original description)


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044444-RA
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Brara.K00029.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G071150.1 No alias Unknown function 0.05 Orthogroups_2024-Update
PSME_00033396-RA No alias (at3g07350 : 152.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
Potri.004G184700 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Potri.011G053300 No alias Protein of unknown function (DUF506) 0.05 Orthogroups_2024-Update
Pp1s30_141V6 No alias F5N5.17; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.001G247400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g065760 No alias DUF506 family protein (AHRD V3.3 *** G7ICN8_MEDTR) 0.02 Orthogroups_2024-Update
Sopen06g019070 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 64 255
No external refs found!