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  5. PSME_00044524-RA

PSME_00044524-RA


Description : (at1g31320 : 197.0) LOB domain-containing protein 4 (LBD4); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: ASYMMETRIC LEAVES 2-like 9 (TAIR:AT1G16530.1); Has 1039 Blast hits to 1034 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1039; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044524-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_32358 No alias lob domain-containing protein 15 0.02 Orthogroups_2024-Update
At2g30340 No alias LBD13 [Source:UniProtKB/TrEMBL;Acc:A0A178VRU4] 0.03 Orthogroups_2024-Update
Brara.B01673.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C02074.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G01214.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.03 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G012720.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
MA_16891g0020 No alias (at5g63090 : 162.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
MA_927067g0010 No alias (at2g28500 : 120.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.04 Orthogroups_2024-Update
Potri.010G177100 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Potri.010G184400 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Potri.018G052700 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Pp1s66_56V6 No alias T19E23.11; LOB domain protein 4 / lateral organ... 0.02 Orthogroups_2024-Update
Pp1s71_7V6 No alias MGF10.6; LOB domain protein 25 / lateral organ... 0.02 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 14 111
No external refs found!