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  5. PSME_00044629-RA

PSME_00044629-RA


Description : (at5g14230 : 484.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 968.0) & (original description: no original description)


Gene families : OG_42_0001604 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001604_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044629-RA
Cluster HCCA clusters: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
At5g14230 No alias CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing... 0.02 Orthogroups_2024-Update
Brara.C00614.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00003808-RA No alias (at5g14230 : 415.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.03 Orthogroups_2024-Update
PSME_00030805-RA No alias (at5g14230 : 489.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.04 Orthogroups_2024-Update
PSME_00042173-RA No alias (at5g14230 : 470.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.04 Orthogroups_2024-Update
PSME_00049021-RA No alias (at5g14230 : 317.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.04 Orthogroups_2024-Update
PSME_00049426-RA No alias (at5g14230 : 573.0) CONTAINS InterPro DOMAIN/s: Ankyrin... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 354 432
IPR020683 Ankyrin_rpt-contain_dom 141 228
No external refs found!