1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00044641-RA

PSME_00044641-RA


Description : (p52578|ifrh_soltu : 124.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at1g75290 : 120.0) encodes a protein whose sequence is similar to an isoflavone reductase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044641-RA
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Brara.A00368.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update
Glyma.04G012300 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
PSME_00009043-RA No alias (p52578|ifrh_soltu : 272.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
Potri.005G228700 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 134 184
No external refs found!