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  5. PSME_00044667-RA

PSME_00044667-RA


Description : (at3g21360 : 243.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)


Gene families : OG_42_0001175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044667-RA
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
439273 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Bradi3g34920 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.06 Orthogroups_2024-Update
MA_10427711g0010 No alias (at3g21360 : 233.0) 2-oxoglutarate (2OG) and... 0.09 Orthogroups_2024-Update
Mp3g23080.1 No alias Clavaminate synthase-like protein At3g21360... 0.03 Orthogroups_2024-Update
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.02 Orthogroups_2024-Update
PSME_00006834-RA No alias (at3g21360 : 254.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00039920-RA No alias (at3g21360 : 263.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00040423-RA No alias (at3g21360 : 246.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00043250-RA No alias (at3g21360 : 228.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00050620-RA No alias (at3g21360 : 240.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00050979-RA No alias (at3g21360 : 253.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00051247-RA No alias (at3g21360 : 96.7) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00054983-RA No alias (at3g21360 : 156.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 54 311
No external refs found!