Description : (at2g22070 : 545.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 988.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00044695-RA | |
Cluster | HCCA clusters: Cluster_156 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
92008 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_21718 | No alias | pentatricopeptide repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
At2g34400 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.06 | Orthogroups_2024-Update | |
At3g16610 | No alias | Pentatricopeptide repeat-containing protein At3g16610... | 0.03 | Orthogroups_2024-Update | |
At3g23330 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
At3g25060 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
At4g14170 | No alias | Pentatricopeptide repeat-containing protein At4g14170... | 0.02 | Orthogroups_2024-Update | |
Glyma.02G227300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.04G203500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G034600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G073540.14 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G114390.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g53050 | No alias | tetratricopeptide-like helical, putative, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os04g39410 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g33920 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os09g38310 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_432641g0020 | No alias | (at1g20230 : 666.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00006196-RA | No alias | (at1g11290 : 685.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00010952-RA | No alias | (at4g21065 : 218.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00017651-RA | No alias | (at4g13650 : 592.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00018595-RA | No alias | (at1g11290 : 678.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00030185-RA | No alias | (at3g57430 : 680.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
PSME_00034399-RA | No alias | (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
Potri.015G034900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Seita.4G168200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G057100.1 | No alias | RNA editing factor *(OTP85) | 0.02 | Orthogroups_2024-Update | |
Solyc02g069500 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc03g096610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
Solyc09g065710 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
Sopen01g041720 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen06g033290 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
No external refs found! |