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Description : (at2g01940 : 300.0) May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.; SHOOT GRAVITROPISM 5 (SGR5); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 13187 Blast hits to 8766 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 12025; Fungi - 55; Plants - 746; Viruses - 1; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)
Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00044720-RA | |
| Cluster | HCCA clusters: Cluster_551 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_19698 | No alias | protein indeterminate-domain 11 | 0.01 | Orthogroups_2024-Update | |
| Brara.H00083.1 | No alias | C2H2 subclass IDD transcription factor | 0.01 | Orthogroups_2024-Update | |
| GRMZM2G042666 | No alias | indeterminate(ID)-domain 4 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G171073 | No alias | C2H2-like zinc finger protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G179677 | No alias | indeterminate(ID)-domain 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G179700 | No alias | indeterminate(ID)-domain 4 | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G107500 | No alias | indeterminate(ID)-domain 14 | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G170200 | No alias | indeterminate(ID)-domain 16 | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g45054 | No alias | ZOS2-15 - C2H2 zinc finger protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.002G263600 | No alias | indeterminate(ID)-domain 2 | 0.02 | Orthogroups_2024-Update | |
| Potri.005G215100 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.T034600 | No alias | indeterminate(ID)-domain 2 | 0.01 | Orthogroups_2024-Update | |
| Seita.9G504400.1 | No alias | C2H2 subclass IDD transcription factor & elicitor... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |