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  5. PSME_00044812-RA

PSME_00044812-RA


Description : (at1g80760 : 293.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (p08995|no26_soybn : 207.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 586.0) & (original description: no original description)


Gene families : OG_42_0000209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044812-RA
Cluster HCCA clusters: Cluster_770

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08930 No alias NOD26-like intrinsic protein 1;2 0.04 Orthogroups_2024-Update
Bradi3g17101 No alias NOD26-like intrinsic protein 5;1 0.03 Orthogroups_2024-Update
Brara.E00986.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.02 Orthogroups_2024-Update
Brara.G03703.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G014440.3 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
LOC_Os06g12310 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001732-RA No alias (at4g18910 : 263.0) Encodes an aquaporin homolog.... 0.09 Orthogroups_2024-Update
PSME_00025106-RA No alias (at1g80760 : 300.0) Encodes a protein with boron... 0.03 Orthogroups_2024-Update
PSME_00033769-RA No alias (at4g18910 : 263.0) Encodes an aquaporin homolog.... 0.03 Orthogroups_2024-Update
PSME_00046327-RA No alias (at4g18910 : 271.0) Encodes an aquaporin homolog.... 0.07 Orthogroups_2024-Update
Potri.001G455000 No alias NOD26-like intrinsic protein 5;1 0.03 Orthogroups_2024-Update
Seita.1G025100.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.02 Orthogroups_2024-Update
Seita.6G062300.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.04 Orthogroups_2024-Update
Sopen05g003920 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 56 264
No external refs found!