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  5. PSME_00044974-RA

PSME_00044974-RA


Description : (at5g39160 : 122.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 2 (TAIR:AT5G39190.1). & (q9spv5|nec1_nicpl : 112.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044974-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
118954 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
A4A49_17289 No alias germin-like protein subfamily 3 member 2 0.03 Orthogroups_2024-Update
At1g18970 No alias Germin-like protein subfamily T member 1... 0.03 Orthogroups_2024-Update
Bradi2g60860 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Orthogroups_2024-Update
Bradi3g43650 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G036720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.01 Orthogroups_2024-Update
PSME_00037269-RA No alias (at4g14630 : 236.0) germin-like protein with N-terminal... 0.04 Orthogroups_2024-Update
Potri.011G162600 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G038600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G050100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G066800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G067008.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G067100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G067616.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G151300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 51 124
No external refs found!