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  5. PSME_00044986-RA

PSME_00044986-RA


Description : (at1g75710 : 317.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description)


Gene families : OG_42_0000675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00044986-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_11766 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi4g24244 No alias C2H2-like zinc finger protein 0.01 Orthogroups_2024-Update
Brara.A01694.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G028046 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Glyma.13G285800 No alias zinc finger protein-related 0.05 Orthogroups_2024-Update
Glyma.14G218700 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G061070.1 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_17724g0010 No alias (at1g75710 : 331.0) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
Potri.001G249900 No alias zinc finger (C2H2 type) family protein 0.02 Orthogroups_2024-Update
Potri.004G030800 No alias zinc finger (C2H2 type) family protein 0.01 Orthogroups_2024-Update
Potri.005G173400 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Solyc11g013220 No alias C2H2-like zinc finger protein (AHRD V3.3 *** A0A061FHR6_THECC) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!